![]() |
Home | Main Page | Modules | Namespace List | Class Hierarchy | Alphabetical List | Data Structures | File List | Namespace Members | Data Fields | Globals | Related Pages |
#include <itkStatisticalShapePointPenalty.h>
Computes the Mahalanobis distance between the transformed shape and a mean shape. A model mean and covariance are required.
Definition at line 57 of file itkStatisticalShapePointPenalty.h.
Public Types | |
typedef SmartPointer< const Self > | ConstPointer |
typedef OutputPointType::CoordRepType | CoordRepType |
typedef Superclass::DerivativeType | DerivativeType |
typedef Superclass::DerivativeValueType | DerivativeValueType |
typedef Superclass::FixedPointSetConstPointer | FixedPointSetConstPointer |
typedef Superclass::FixedPointSetType | FixedPointSetType |
typedef Superclass::InputPointType | InputPointType |
typedef Superclass::MeasureType | MeasureType |
typedef Superclass::MovingPointSetConstPointer | MovingPointSetConstPointer |
typedef Superclass::MovingPointSetType | MovingPointSetType |
typedef Superclass::NonZeroJacobianIndicesType | NonZeroJacobianIndicesType |
typedef Superclass::OutputPointType | OutputPointType |
typedef vnl_svd_economy< CoordRepType > | PCACovarianceType |
typedef Superclass::PointDataIterator | PointDataIterator |
typedef SmartPointer< Self > | Pointer |
typedef Superclass::PointIterator | PointIterator |
typedef std::vector< VnlVectorType * > | ProposalDerivativeType |
typedef StatisticalShapePointPenalty | Self |
typedef SingleValuedPointSetToPointSetMetric< TFixedPointSet, TMovingPointSet > | Superclass |
typedef Superclass::TransformJacobianType | TransformJacobianType |
typedef Superclass::TransformParametersType | TransformParametersType |
typedef Superclass::TransformPointer | TransformPointer |
typedef Superclass::TransformType | TransformType |
typedef vnl_matrix< CoordRepType > | VnlMatrixType |
typedef vnl_vector< CoordRepType > | VnlVectorType |
![]() | |
typedef SmartPointer< const Self > | ConstPointer |
typedef Superclass::ParametersValueType | CoordinateRepresentationType |
typedef Superclass::DerivativeType | DerivativeType |
typedef DerivativeType::ValueType | DerivativeValueType |
typedef FixedImageMaskType::ConstPointer | FixedImageMaskConstPointer |
typedef FixedImageMaskType::Pointer | FixedImageMaskPointer |
typedef SpatialObject< itkGetStaticConstMacro(FixedPointSetDimension) > | FixedImageMaskType |
typedef FixedPointSetType::ConstPointer | FixedPointSetConstPointer |
typedef FixedPointSetType::PixelType | FixedPointSetPixelType |
typedef TFixedPointSet | FixedPointSetType |
typedef TransformType::InputPointType | InputPointType |
typedef Superclass::MeasureType | MeasureType |
typedef MovingImageMaskType::ConstPointer | MovingImageMaskConstPointer |
typedef MovingImageMaskType::Pointer | MovingImageMaskPointer |
typedef SpatialObject< itkGetStaticConstMacro(MovingPointSetDimension) > | MovingImageMaskType |
typedef MovingPointSetType::ConstPointer | MovingPointSetConstPointer |
typedef MovingPointSetType::PixelType | MovingPointSetPixelType |
typedef TMovingPointSet | MovingPointSetType |
typedef TransformType::NonZeroJacobianIndicesType | NonZeroJacobianIndicesType |
typedef TransformType::OutputPointType | OutputPointType |
typedef Superclass::ParametersType | ParametersType |
typedef FixedPointSetType::PointDataContainer::ConstIterator | PointDataIterator |
typedef SmartPointer< Self > | Pointer |
typedef FixedPointSetType::PointsContainer::ConstIterator | PointIterator |
typedef SingleValuedPointSetToPointSetMetric | Self |
typedef SingleValuedCostFunction | Superclass |
typedef TransformType::JacobianType | TransformJacobianType |
typedef TransformType::ParametersType | TransformParametersType |
typedef TransformType::Pointer | TransformPointer |
typedef AdvancedTransform< CoordinateRepresentationType, itkGetStaticConstMacro(FixedPointSetDimension), itkGetStaticConstMacro(MovingPointSetDimension) > | TransformType |
Static Public Member Functions | |
static Pointer | New () |
Protected Member Functions | |
void | PrintSelf (std::ostream &os, Indent indent) const |
StatisticalShapePointPenalty () | |
virtual | ~StatisticalShapePointPenalty () |
![]() | |
void | PrintSelf (std::ostream &os, Indent indent) const |
SingleValuedPointSetToPointSetMetric () | |
virtual | ~SingleValuedPointSetToPointSetMetric () |
Private Member Functions | |
void | CalculateCutOffDerivative (typename DerivativeType::element_type &derivativeElement, const MeasureType &value) const |
void | CalculateCutOffValue (MeasureType &value) const |
void | CalculateDerivative (DerivativeType &derivative, const MeasureType &value, const VnlVectorType &differenceVector, const VnlVectorType ¢errotated, const VnlVectorType &eigrot, const unsigned int shapeLength) const |
void | CalculateValue (MeasureType &value, VnlVectorType &differenceVector, VnlVectorType ¢errotated, VnlVectorType &eigrot) const |
void | FillProposalDerivative (const OutputPointType &fixedPoint, const unsigned int vertexindex) const |
void | FillProposalVector (const OutputPointType &fixedPoint, const unsigned int vertexindex) const |
void | NormalizeProposalVector (const unsigned int shapeLength) const |
void | operator= (const Self &) |
StatisticalShapePointPenalty (const Self &) | |
void | UpdateCentroidAndAlignProposalDerivative (const unsigned int shapeLength) const |
void | UpdateCentroidAndAlignProposalVector (const unsigned int shapeLength) const |
void | UpdateL2 (const unsigned int shapeLength) const |
void | UpdateL2AndNormalizeProposalDerivative (const unsigned int shapeLength) const |
Additional Inherited Members | |
![]() | |
FixedImageMaskConstPointer | m_FixedImageMask |
FixedPointSetConstPointer | m_FixedPointSet |
MovingImageMaskConstPointer | m_MovingImageMask |
MovingPointSetConstPointer | m_MovingPointSet |
unsigned int | m_NumberOfPointsCounted |
TransformPointer | m_Transform |
bool | m_UseMetricSingleThreaded |
typedef SmartPointer< const Self > itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::ConstPointer |
Definition at line 67 of file itkStatisticalShapePointPenalty.h.
typedef OutputPointType::CoordRepType itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::CoordRepType |
Definition at line 97 of file itkStatisticalShapePointPenalty.h.
typedef Superclass::DerivativeType itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::DerivativeType |
Definition at line 84 of file itkStatisticalShapePointPenalty.h.
typedef Superclass::DerivativeValueType itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::DerivativeValueType |
Definition at line 85 of file itkStatisticalShapePointPenalty.h.
typedef Superclass::FixedPointSetConstPointer itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::FixedPointSetConstPointer |
Definition at line 88 of file itkStatisticalShapePointPenalty.h.
typedef Superclass::FixedPointSetType itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::FixedPointSetType |
Definition at line 86 of file itkStatisticalShapePointPenalty.h.
typedef Superclass::InputPointType itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::InputPointType |
Definition at line 94 of file itkStatisticalShapePointPenalty.h.
typedef Superclass::MeasureType itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::MeasureType |
Definition at line 83 of file itkStatisticalShapePointPenalty.h.
typedef Superclass::MovingPointSetConstPointer itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::MovingPointSetConstPointer |
Definition at line 89 of file itkStatisticalShapePointPenalty.h.
typedef Superclass::MovingPointSetType itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::MovingPointSetType |
Definition at line 87 of file itkStatisticalShapePointPenalty.h.
typedef Superclass::NonZeroJacobianIndicesType itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::NonZeroJacobianIndicesType |
Definition at line 81 of file itkStatisticalShapePointPenalty.h.
typedef Superclass::OutputPointType itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::OutputPointType |
Definition at line 95 of file itkStatisticalShapePointPenalty.h.
typedef vnl_svd_economy< CoordRepType > itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::PCACovarianceType |
Definition at line 103 of file itkStatisticalShapePointPenalty.h.
typedef Superclass::PointDataIterator itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::PointDataIterator |
Definition at line 92 of file itkStatisticalShapePointPenalty.h.
typedef SmartPointer< Self > itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::Pointer |
Definition at line 66 of file itkStatisticalShapePointPenalty.h.
typedef Superclass::PointIterator itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::PointIterator |
Definition at line 91 of file itkStatisticalShapePointPenalty.h.
typedef std::vector< VnlVectorType * > itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::ProposalDerivativeType |
Definition at line 101 of file itkStatisticalShapePointPenalty.h.
typedef StatisticalShapePointPenalty itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::Self |
Standard class typedefs.
Definition at line 63 of file itkStatisticalShapePointPenalty.h.
typedef SingleValuedPointSetToPointSetMetric< TFixedPointSet, TMovingPointSet > itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::Superclass |
Definition at line 65 of file itkStatisticalShapePointPenalty.h.
typedef Superclass::TransformJacobianType itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::TransformJacobianType |
Definition at line 80 of file itkStatisticalShapePointPenalty.h.
typedef Superclass::TransformParametersType itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::TransformParametersType |
Definition at line 79 of file itkStatisticalShapePointPenalty.h.
typedef Superclass::TransformPointer itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::TransformPointer |
Definition at line 78 of file itkStatisticalShapePointPenalty.h.
typedef Superclass::TransformType itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::TransformType |
Types transferred from the base class
Definition at line 74 of file itkStatisticalShapePointPenalty.h.
typedef vnl_matrix< CoordRepType > itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::VnlMatrixType |
Definition at line 99 of file itkStatisticalShapePointPenalty.h.
typedef vnl_vector< CoordRepType > itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::VnlVectorType |
Definition at line 98 of file itkStatisticalShapePointPenalty.h.
|
protected |
|
protectedvirtual |
|
private |
|
virtual |
|
virtual |
|
private |
|
private |
|
private |
|
private |
|
private |
|
private |
|
virtual |
|
virtual |
|
virtual |
|
virtual |
|
virtual |
Run-time type information (and related methods).
Reimplemented from itk::SingleValuedPointSetToPointSetMetric< TFixedPointSet, TMovingPointSet >.
Reimplemented in elastix::StatisticalShapePenalty< TElastix >.
|
virtual |
|
virtual |
void itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::GetDerivative | ( | const TransformParametersType & | parameters, |
DerivativeType & | Derivative | ||
) | const |
Get the derivatives of the match measure.
|
virtual |
|
virtual |
|
virtual |
|
virtual |
MeasureType itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::GetValue | ( | const TransformParametersType & | parameters | ) | const |
Get the value for single valued optimizers.
void itk::StatisticalShapePointPenalty< TFixedPointSet, TMovingPointSet >::GetValueAndDerivative | ( | const TransformParametersType & | parameters, |
MeasureType & | Value, | ||
DerivativeType & | Derivative | ||
) | const |
Get value and derivatives for multiple valued optimizers.
|
virtual |
Initialization.
Reimplemented from itk::SingleValuedPointSetToPointSetMetric< TFixedPointSet, TMovingPointSet >.
|
static |
Method for creation through the object factory.
|
virtual |
|
virtual |
|
private |
|
private |
|
protected |
PrintSelf.
|
virtual |
Set/Get the BaseVariance parameter.
|
virtual |
|
virtual |
|
virtual |
|
virtual |
|
virtual |
|
virtual |
|
virtual |
|
virtual |
|
virtual |
|
virtual |
|
virtual |
|
virtual |
|
virtual |
Set/Get the shrinkageIntensity parameter.
|
virtual |
|
virtual |
|
virtual |
|
virtual |
|
virtual |
|
private |
|
private |
|
private |
|
private |
|
virtual |
|
virtual |
|
private |
Definition at line 246 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 245 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 235 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 226 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 225 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 228 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 227 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 230 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 229 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 219 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 251 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 250 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 221 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 238 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 220 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 223 of file itkStatisticalShapePointPenalty.h.
|
mutableprivate |
Definition at line 248 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 218 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 242 of file itkStatisticalShapePointPenalty.h.
|
mutableprivate |
Definition at line 240 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 241 of file itkStatisticalShapePointPenalty.h.
|
mutableprivate |
Definition at line 247 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 243 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 244 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 234 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 232 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 231 of file itkStatisticalShapePointPenalty.h.
|
private |
Definition at line 236 of file itkStatisticalShapePointPenalty.h.
Generated on 07-03-2016 for elastix by ![]() |
![]() |