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Computer Assited Medical Intervention Tool Kit
version 4.0
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The manager of the Image Volume data. More...
#include <ImageComponent.h>
Inherits camitk::Component.
Inherited by DicomComponent, DicomItkComponent, DicomTreeSerieComponent, ItkImageComponent, RawImageComponent, and VtkImageComponent.
Public Member Functions | |
double | getActualMaxColor () const |
Max gray level found in the image given its data type. More... | |
double | getActualMinColor () const |
Min gray level found in the image given its data type. More... | |
int | getActualNumberOfColors () const |
Actual Number of colors: difference betweent the maximun and the minimum gray levels found in the image. More... | |
SingleImageComponent * | getArbitrarySlices () |
Returns the arbitrary slice. More... | |
SingleImageComponent * | getAxialSlices () |
Returns the axial slice. More... | |
SingleImageComponent * | getCoronalSlices () |
Returns the coronal slice. More... | |
vtkSmartPointer< vtkImageData > | getImageData () const |
get the image volume managed by this Component More... | |
vtkSmartPointer< vtkImageData > | getImageDataWithFrameTransform () |
Compute a copy of the original image data on which the frame transform has been applied. More... | |
QString | getImageName () const |
getter/setter for the property More... | |
ImageOrientationHelper::PossibleImageOrientations | getInitialOrientation () const |
Get the initial image orientation. More... | |
void | getLastPixelPicked (int *x, int *y, int *z) |
Get the last pixel picked using CTRL + LEFT/RIGHT CLICK in voxel index (i, j, k) indicates the voxel index (no notion of voxel size) More... | |
void | getLastPointPickedImageCoords (double *x, double *y, double *z) |
Get the last point picked using CTRL + LEFT/RIGHT CLICK in image real coordinates (this takes into account voxel size) More... | |
void | getLastPointPickedWorldCoords (double *x, double *y, double *z) |
Get Get the last point picked using CTRL + LEFT/RIGHT CLICK in world coordinates This takes into account voxel size and image origin (and possible image rigid transforms). More... | |
virtual vtkSmartPointer< vtkWindowLevelLookupTable > | getLut () |
get the current lookup table More... | |
double | getMaxColor () const |
Max possible gray level of the image given its data type. More... | |
double | getMinColor () const |
Min possible gray level of the image given its data type. More... | |
int | getNumberOfColors () const |
Number of colors: number of possible gray levels in the image computed from the min and the max of the data type ; e.g. More... | |
int | getNumberOfSlices () const |
Number of axial slices (i.e. More... | |
const vtkSmartPointer< vtkMatrix4x4 > | getRotationMatrix () |
SingleImageComponent * | getSagittalSlices () |
Returns the sagittal slice. More... | |
MeshComponent * | getVolumeRenderingChild () |
Returns the MeshComponent which will contain the volume rendering actor. More... | |
ImageComponent (const QString &file) throw ( AbortException ) | |
constructor More... | |
ImageComponent (vtkSmartPointer< vtkImageData > anImageData, const QString &name, bool copy=false, ImageOrientationHelper::PossibleImageOrientations initialOrientation=ImageOrientationHelper::RAI) throw ( AbortException ) | |
Creates an ImageComponent from a vtkImageData. More... | |
void | pixelPicked (double x, double y, double z, SingleImageComponent *whoIsAsking) |
Method called when a pixel has been picked in the 3D view. More... | |
virtual void | refresh () const |
force refresh of all interactive viewers that are displayng sub-components as ImageComponent is not itself displayed by any viewer More... | |
virtual void | replaceImageData (vtkSmartPointer< vtkImageData > anImageData, bool copy=false, ImageOrientationHelper::PossibleImageOrientations initialOrientation=ImageOrientationHelper::RAI) |
Replaces the current image volume by the one given in parameters. More... | |
void | setImageName (const QString &) |
virtual void | setLut (vtkSmartPointer< vtkWindowLevelLookupTable > lookupTable) |
Update the lookup table of the image viewer (see InterfaceBitMap). More... | |
virtual void | setSelected (const bool b, const bool recursive=false) |
set selected will select all the Image components (axial, sagittal and coronal). More... | |
virtual | ~ImageComponent () |
Destructor. More... | |
InterfaceProperty | |
InterfaceProperty implemented methods | |
virtual void | updateProperty (QString, QVariant) |
virtual unsigned int | getNumberOfPropertyWidget () |
return number of tabs in property explorer: there is more than one widget More... | |
virtual QWidget * | getPropertyWidgetAt (unsigned int i, QWidget *parent=0) |
get the property widget (to view as tabs in the property explorer): the default property widget and the selection view More... | |
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Component (const QString &file, const QString &name, Representation rep=NO_REPRESENTATION) | |
Component constructor for top-level component (please use the other constructor for sub-level components). More... | |
Component (Component *parentComponent, const QString &name, Representation rep=NO_REPRESENTATION) throw (AbortException) | |
Component constructor for a Component that is a child of another Component You should not use this constructor for a top-level component. More... | |
virtual | ~Component () |
default destructor. More... | |
Representation | getRepresentation () const |
return the type of representation concretely implemented by this Component in the InteractiveViewer. More... | |
bool | isTopLevel () const |
return true if this component is a top-level component More... | |
virtual Component * | getParentComponent () |
get the parent component More... | |
virtual Component * | getTopLevelComponent () |
get the top-level component More... | |
virtual InterfaceFrame * | getFrame () |
get the associated frame More... | |
virtual void | setModified (bool modified=true) |
set the modified flag More... | |
virtual bool | getModified () const |
set the modified flag More... | |
virtual void | setVisibility (Viewer *, bool) |
set the visibility for a viewer More... | |
virtual bool | getVisibility (Viewer *) const |
get the visibility of a viewer More... | |
virtual void | refreshInterfaceNode () |
Asks all viewers that are currently displaying this Component to rebuild the representation of the InterfaceNode for this Component. More... | |
virtual bool | isSelected () const |
Check if this data component is selected. More... | |
const QString | getFileName () const |
get the file name where the data have to be stored/were stored More... | |
void | setFileName (const QString &) |
set the file name where the data have to be stored More... | |
bool | event (QEvent *e) |
Overriden from QObject, this one is only intercepting signal for dynamic property changed (see constructor). More... | |
QMenu * | getActionMenu () |
Get a QMenu that contains all the action that can be applied to this component. More... | |
QStringList | getHierarchy () |
bool | isInstanceOf (QString className) |
Assert that a Component instance really inherits from a given className. More... | |
virtual QObject * | getPropertyObject () |
Get the property object that could be understood by PropertyEditor. More... | |
virtual Q_INVOKABLE Property * | getProperty (QString name) |
Get a Property given its name. More... | |
virtual bool | addProperty (Property *) |
Add a new CamiTK property to the component. More... | |
virtual void | addChild (InterfaceNode *) |
add a child Component (sub item in the hierarchy), and modify the child's parent to be equal to this instance More... | |
virtual void | attachChild (InterfaceNode *) |
add a child Component (but leave its parent unchanged) More... | |
virtual void | removeChild (InterfaceNode *) |
remove from the the sub item vector. More... | |
virtual void | setParent (InterfaceNode *) |
set the parent Component. This method automatically remove this Component from its previous (if already had one parent Component) More... | |
virtual void | deleteChildren () |
delete all sub Component, but do not delete the pointer (only the top-level component has the right to do that) More... | |
virtual QString | getName () const |
get the name to be displayed More... | |
virtual void | setName (const QString &) |
set the name to be displayed More... | |
virtual const ComponentList & | getChildren () |
get the list of the InterfaceNode children (sub items in the hierarchy) More... | |
virtual bool | doubleClicked () |
this method is called each time the InterfaceNode is double clicked by the user. More... | |
virtual InterfaceNode * | getParent () |
get the parent Component More... | |
virtual QPixmap | getIcon () |
Get the pixmap that will be displayed for this node. More... | |
virtual bool | inItalic () const |
A component name is not displayed in italic by default. More... | |
virtual QMenu * | getPopupMenu (QWidget *parent=0) |
get the popup menu to display (always return NULL, overwrite this method if you want to give here you own popup) More... | |
const QString | getLabel () const |
void | setLabel (QString newName) |
set the string used to display the label, do the same as setName More... | |
delegateGet0 (myGeometry, getPointSet, vtkSmartPointer< vtkPointSet >) delegate1(myGeometry | |
vtkSmartPointer< vtkPointSet > | delegate1 (myGeometry, setPointData, vtkSmartPointer< vtkDataArray >) delegateConstGet0(myGeometry |
vtkSmartPointer< vtkPointSet > vtkSmartPointer< vtkAlgorithmOutput > | delegate1 (myGeometry, setDataConnection, vtkSmartPointer< vtkAlgorithmOutput >) delegateGet1(myGeometry |
vtkSmartPointer< vtkPointSet > vtkSmartPointer< vtkAlgorithmOutput > const virtual RenderingModes vtkSmartPointer< vtkProp > | getProp (const QString ¶m) |
Return the vtkProp (actors, volumes and annotations) corresponding to the given name. More... | |
virtual unsigned int | getNumberOfProp () const |
return the number of additional prop More... | |
virtual vtkSmartPointer< vtkProp > | getProp (unsigned int index) |
return an additional prop by its index More... | |
virtual bool | addProp (const QString &name, vtkSmartPointer< vtkProp > prop) |
insert an additional prop, defining it by its name (default visibility = false). More... | |
virtual bool | removeProp (const QString &name) |
remove a given additional prop. More... | |
virtual void | pointPicked (vtkIdType, bool) |
an inherited class can redefine this method something specific. More... | |
virtual void | cellPicked (vtkIdType, bool) |
an inherited class can redefine this method something specific. More... | |
virtual void | getBounds (double *bounds) |
compute the object's bounding box [xmin,xmax, ymin,ymax, zmin,zmax], see Component.cpp More... | |
virtual double | getBoundingRadius () |
compute the object's bounding sphere radius, More... | |
delegate4 (myGeometry, setPointPosition, const unsigned int, const double, const double, const double) delegateAndInvokeChildren1(myGeometry | |
const virtual RenderingModes const InterfaceGeometry::RenderingModes | getRenderingModes () const |
see Component.cpp More... | |
delegateAndInvokeChildren1 (myGeometry, setEnhancedModes, const EnhancedModes) delegateConstGet0(myGeometry | |
const EnhancedModes | delegateAndInvokeChildren1Array (myGeometry, setActorColor, const RenderingModes, double, 4) delegateAndInvokeChildren4(myGeometry |
const EnhancedModes const const const const virtual double void | getActorColor (const RenderingModes, double [4]) |
see Component.cpp More... | |
delegateAndInvokeChildren3 (myGeometry, setColor, const double, const double, const double) delegateAndInvokeChildren4(myGeometry | |
const const const const double | delegateAndInvokeChildren2 (myGeometry, setActorOpacity, const RenderingModes, const double) delegateConstGet1(myGeometry |
const const const const double const RenderingModes | delegateAndInvokeChildren1 (myGeometry, setOpacity, const double) delegate2(myGeometry |
const const const const double const RenderingModes double | delegate1 (myGeometry, setTexture, vtkSmartPointer< vtkTexture >) virtual void setGlyphType(const GlyphTypes type |
delegate1 (myGeometry, setLinesAsTubes, bool) delegate1(myGeometry | |
delegateConstGet0 (mySlice, getImageData, vtkSmartPointer< vtkImageData >) delegate1(mySlice | |
vtkSmartPointer< vtkImageData > | delegateConstGet0 (mySlice, get2DImageActor, vtkSmartPointer< vtkImageActor >) delegateConstGet0(mySlice |
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > | delegateConstGet0 (mySlice, getPickPlaneActor, vtkSmartPointer< vtkActor >) delegateGet0(mySlice |
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > vtkSmartPointer< vtkActor > | delegate3 (mySlice, pixelPicked, double, double, double) delegate0(mySlice |
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > vtkSmartPointer< vtkActor > updatePickPlane | delegate1 (mySlice, setSlice, int) delegate3(mySlice |
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > vtkSmartPointer< vtkActor > updatePickPlane double | delegate1 (mySlice, setRotationX, double) delegate1(mySlice |
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > vtkSmartPointer< vtkActor > updatePickPlane double double | delegate1 (mySlice, setRotationZ, double) delegateConstGet0(mySlice |
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > vtkSmartPointer< vtkActor > updatePickPlane double double int | delegate3 (mySlice, setPixelRealPosition, double, double, double) delegate1(mySlice |
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > vtkSmartPointer< vtkActor > updatePickPlane double double int virtual vtkSmartPointer< vtkTransform > double | getRotationX () const |
see Component.cpp More... | |
virtual double | getRotationY () const |
see Component.cpp More... | |
virtual double | getRotationZ () const |
see Component.cpp More... | |
virtual int | getSlice () const |
see Component.cpp More... | |
const QString & | getFrameName () const |
Hierarchy accessors / Modifyers. More... | |
delegate1 (myFrame, setFrameName, QString) InterfaceFrame *getParentFrame() const | |
void | setParentFrame (InterfaceFrame *frame, bool keepTransform=true) |
Set the parent frame and update or not its transform during the parent transition. More... | |
const QVector< InterfaceFrame * > & | getChildrenFrame () const |
Get the Children Frames from the current Frame in the Frame Hierarchy The Frame hierarchy may not be the same as the Component Hierarchy. More... | |
const vtkSmartPointer< vtkTransform > | getTransformFromWorld () const |
Transforms accessors / Modifyers. More... | |
const vtkSmartPointer< vtkTransform > | getTransform () const |
Get the transformation with respect to the parent frame. More... | |
const vtkSmartPointer< vtkTransform > | getTransformFromFrame (InterfaceFrame *frame) const |
Compute the transformation from any other frame to the current frame. More... | |
delegate1 (myFrame, setTransform, vtkSmartPointer< vtkTransform >) delegate0(myFrame | |
resetTransform | delegate3 (myFrame, translate, double, double, double) delegate3(myFrame |
resetTransform double | delegate3 (myFrame, rotateVTK, double, double, double) delegate3(myFrame |
resetTransform double double | delegate3 (myFrame, setTransformTranslationVTK, double, double, double) delegate3(myFrame |
resetTransform double double double | delegate3 (myFrame, setTransformRotationVTK, double, double, double) vtkSmartPointer< vtkAxesActor > getFrameAxisActor() |
delegate2 (myFrame, setFrameVisibility, Viewer *, bool) bool getFrameVisibility(Viewer *viewer) const | |
delegate1 (myFrame, addFrameChild, InterfaceFrame *) delegate1(myFrame | |
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virtual unsigned int | getIndexOfPropertyExplorerTab ()=0 |
Get the index of the tab in the PropertyExplorer to select for display. More... | |
virtual void | setIndexOfPropertyExplorerTab (unsigned int index)=0 |
Set the index of the tab in the PropertyExplorer to select for display. More... | |
virtual | ~InterfaceProperty () |
empty virtual destructor, to avoid memory leak More... | |
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virtual | ~InterfaceNode () |
empty virtual destructor, to avoid memory leak More... | |
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virtual | ~InterfaceGeometry () |
empty virtual destructor, to avoid memory leak More... | |
virtual vtkSmartPointer< vtkPointSet > | getPointSet ()=0 |
virtual void | setPointSet (vtkSmartPointer< vtkPointSet >)=0 |
set the low-level data set. More... | |
virtual void | setPointData (vtkSmartPointer< vtkDataArray >)=0 |
set the point data (may contains a lookup table). More... | |
virtual void | setMeshWorldTransform (vtkSmartPointer< vtkTransform >)=0 |
set the transformation for 3D representation More... | |
virtual vtkSmartPointer< vtkAlgorithmOutput > | getDataPort () const =0 |
get the custom algorithm pipeline input. More... | |
virtual void | setDataConnection (vtkSmartPointer< vtkAlgorithmOutput >)=0 |
Set/reset the connection for the InterfaceGeometry internal algorithm. More... | |
virtual vtkSmartPointer< vtkActor > | getActor (const RenderingModes)=0 |
Return the actor for the representation mode, NULL if the actor doesn't exist. More... | |
virtual void | setTexture (vtkSmartPointer< vtkTexture >)=0 |
Set a texture to this object. More... | |
virtual void | setPointPosition (const unsigned int orderNumber, const double x, const double y, const double z)=0 |
set a given point position More... | |
virtual void | setRenderingModes (const RenderingModes)=0 |
virtual void | setEnhancedModes (const EnhancedModes)=0 |
set the enhanced mode More... | |
virtual const EnhancedModes | getEnhancedModes () const =0 |
get the current enhanced mode More... | |
virtual void | setActorColor (const RenderingModes, double *color)=0 |
Set the color of given representation modes. More... | |
virtual void | setActorColor (const RenderingModes, const double, const double, const double)=0 |
Set the color of given representation modes. More... | |
virtual void | getActorColor (const RenderingModes, double *color)=0 |
Get the color of given representation modes in the second parameter. More... | |
virtual void | setColor (const double, const double, const double)=0 |
Set an (r,g,b) color to all representation modes, without changing the opacity. More... | |
virtual void | setColor (const double, const double, const double, const double)=0 |
Set an (r,g,b,a) color to all representation modes. More... | |
virtual void | setActorOpacity (const RenderingModes, const double)=0 |
Set the opacity of this representation modes. WARNING color field (surfaceColor, ...) are not modified! More... | |
virtual double | getActorOpacity (const RenderingModes) const =0 |
Return the opacity of a given renderng mode. More... | |
virtual void | setOpacity (const double)=0 |
Set the opacity of this object. WARNING color field (surfaceColor, ...) are not modified! More... | |
virtual void | setMapperScalarRange (double min, double max)=0 |
Set the mapper scalar range. More... | |
virtual void | setGlyphType (const GlyphTypes type, const double size=0.0)=0 |
Set the glyph type (a glyph is a geometric representation attached to every point in the input dataset). More... | |
virtual void | setLinesAsTubes (bool)=0 |
set the lines as tubes (works only for vtkDataSet representation that contains lines) More... | |
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virtual void | addFrameChild (InterfaceFrame *frame)=0 |
Add the input frame as a child of the current frame. More... | |
virtual vtkSmartPointer< vtkAxesActor > | getFrameAxisActor ()=0 |
Gives the 3D representation of the frame (based on xyz arrows) More... | |
virtual bool | getFrameVisibility (Viewer *viewer) const =0 |
Get the Component Frame visibility for a given viewer. More... | |
virtual void | removeFrameChild (InterfaceFrame *frame)=0 |
Remove the input frame as a child of the current frame. More... | |
virtual void | setFrameVisibility (Viewer *viewer, bool visible)=0 |
Set the Component Frame visible for a given viewer. More... | |
virtual | ~InterfaceFrame () |
empty virtual destructor, to avoid memory leak More... | |
virtual void | setFrameName (QString name)=0 |
Set the Frame Unique identifyer. More... | |
virtual InterfaceFrame * | getParentFrame () const =0 |
Get the parent frame. More... | |
virtual void | setTransform (vtkSmartPointer< vtkTransform > transform)=0 |
Set the current input frame position (according to its parent Frame) More... | |
virtual void | resetTransform ()=0 |
Set the current frame transform to identity. More... | |
virtual void | translate (double x, double y, double z)=0 |
Apply a translation relative to the current position. More... | |
virtual void | rotate (double aroundX, double aroundY, double aroundZ)=0 |
Apply rotations relative to the current position in the alphabetical order (X, Y, Z). More... | |
virtual void | rotateVTK (double aroundX, double aroundY, double aroundZ)=0 |
Apply a rotation relative to the current position, using the VTK rotation order (Z, X, Y) More... | |
virtual void | setTransformTranslation (double x, double y, double z)=0 |
Set the translation part of the 3D space transformation of the current frame. More... | |
virtual void | setTransformTranslationVTK (double x, double y, double z)=0 |
Set the translation part of the 3D space transformation of the current frame. More... | |
virtual void | setTransformRotation (double aroundX, double aroundY, double aroundZ)=0 |
Set the rotation part of the 3D space transformation of the current frame. More... | |
virtual void | setTransformRotationVTK (double aroundX, double aroundY, double aroundZ)=0 |
Set the rotation part of the 3D space transformation of the current frame. More... | |
Protected Member Functions | |
virtual void | setImageData (vtkSmartPointer< vtkImageData > anImageData, bool copy, ImageOrientationHelper::PossibleImageOrientations initialOrientation=ImageOrientationHelper::RAI, vtkSmartPointer< vtkMatrix4x4 > initialTransformMatrix=NULL) |
Set the image data of the volumic images with the given orientation options. More... | |
virtual void | updateImageProperties () |
Update the Properties displayed in the PropertyExplorer It should be called by setImageData to update the properties with respect to the new image data The properties updated are: More... | |
Private Member Functions | |
void | buildImageComponents () |
build the SingleImage dcs (one for each image plane); More... | |
vtkSmartPointer< vtkPolyData > | getBoundingBox () |
internal method used to put a mesh in volumeRenderingChild and accessoiry display the bounding box More... | |
virtual void | init () |
initialize pointers to NULL and other attributes More... | |
void | initLookupTable () |
virtual void | initRepresentation () |
the concrete building of the 3D objects (Slice/Geometry): none in this case! More... | |
void | updateImageComponents () |
Private Attributes | |
SingleImageComponent * | arbitrarySlices |
SingleImageComponent * | axialSlices |
SingleImageComponent * | coronalSlices |
double | currentPixelPicked [3] |
Store the last pixel selected, in original slices ref. More... | |
vtkSmartPointer< vtkTransform > | initialFrameTransform |
The initial frame of the image at opening. More... | |
vtkSmartPointer< vtkTransform > | initialImageDataTransform |
The initial transform to the vtkImageData. More... | |
ImageOrientationHelper::PossibleImageOrientations | initialOrientation |
Initial image orientation. More... | |
vtkSmartPointer< vtkWindowLevelLookupTable > | lut |
the current lookup table More... | |
QStandardItemModel * | model |
Model to display data. More... | |
vtkSmartPointer< vtkImageData > | originalImageData |
the core Image Volume that is managed here More... | |
vtkSmartPointer< vtkMatrix4x4 > | rotationMatrix |
The rotation matrix, that might have been altered by the user Will be saved in header file information as TransformMatrix tag. More... | |
SingleImageComponent * | sagittalSlices |
QTableView * | selectionView |
Tab displaying data selected point in the property explorer. More... | |
MeshComponent * | volumeRenderingChild |
When an action computes volume rendering for an image, it stores the corresponding actor as a prop of this Component. More... | |
Additional Inherited Members | |
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enum | Representation { GEOMETRY, SLICE, NO_REPRESENTATION } |
The different representation that can be implemented to represent this Component in the InteractiveViewer. More... | |
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enum | EnhancedMode { Normal = 0x0, Hidden = 0x1, Shaded = 0x2, Highlighted = 0x4 } |
(and QFlags EnhancedModes) handle the way the rendering actors will be enhanced or not (from completely hidden to highlighted) More... | |
enum | GlyphType { NoGlyph = 0x0, Sphere = 0x1 } |
(and QFlags GlyphTypes) is the type of glyph attached to the geometry representation More... | |
enum | RenderingMode { None = 0x0, Surface = 0x1, Wireframe = 0x2, Points = 0x4 } |
(and QFlags RenderingModes) handle actor rendering options (render this InterfaceGeometry as a surface, a wireframe and set of points). More... | |
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setPointSet | |
vtkSmartPointer< vtkPointSet > | getDataPort |
vtkSmartPointer< vtkPointSet > vtkSmartPointer< vtkAlgorithmOutput > | getActor |
vtkSmartPointer< vtkPointSet > vtkSmartPointer< vtkAlgorithmOutput > | vtkSmartPointer< vtkActor > |
setRenderingModes | |
getEnhancedModes | |
const EnhancedModes | setActorColor |
const EnhancedModes const | RenderingModes |
const EnhancedModes const const | double |
const EnhancedModes const const const | double |
setColor | |
const | double |
const const | double |
const const const | double |
const const const const double | getActorOpacity |
const const const const double | double |
const const const const double const RenderingModes | setMapperScalarRange |
const const const const double const RenderingModes | double |
const const const const double const RenderingModes double const double | size = 0.0) |
setMeshWorldTransform | |
setOriginalVolume | |
vtkSmartPointer< vtkImageData > | get3DImageActor |
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > | getPixelActor |
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > vtkSmartPointer< vtkActor > updatePickPlane | setSlice |
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > vtkSmartPointer< vtkActor > updatePickPlane | double |
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > vtkSmartPointer< vtkActor > updatePickPlane double | setRotationY |
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > vtkSmartPointer< vtkActor > updatePickPlane double double | getNumberOfColors |
vtkSmartPointer< vtkImageData > vtkSmartPointer< vtkImageActor > vtkSmartPointer< vtkActor > updatePickPlane double double int | setImageWorldTransform |
resetTransform | rotate |
resetTransform | double |
resetTransform double | setTransformTranslation |
resetTransform double | double |
resetTransform double double | setTransformRotation |
resetTransform double double | double |
removeFrameChild | |
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ComponentList | childrenComponent |
The explorer sub items. More... | |
unsigned int | indexOfPropertyExplorerTab |
The PropertyExplorer tab index to select once refreshed. More... | |
bool | isSelectedFlag |
tells if this particular Component is selected or not More... | |
bool | modifiedFlag |
the modificatio flag (could be extended to manage a undo/redo list) More... | |
QString | myFileName |
the file name from which the Component is loaded More... | |
InterfaceFrame * | myFrame |
myFrame is the pose (position and orientation) of the Component in the world frame, the Component delegates all InterfaceFrame activity to myFrame (delegation pattern) More... | |
InterfaceGeometry * | myGeometry |
myGeometry is the 3d representation of this Component, the Component delegates all InterfaceGeometry activity to myGeometry (delegation pattern) More... | |
InterfaceNode * | myParentNode |
who is the boss? The Component! More... | |
InterfaceBitMap * | mySlice |
mySlice is the slice representation of this data component, the Component delegates all InterfaceBitMap activity to mySlice (delegation pattern) More... | |
The manager of the Image Volume data.
An image volume data has no concrete 3D representation, but handles several sub-components for axial, sagittal and coronal slices.
Vtk Pipeline:
*
camitk::ImageComponent::ImageComponent | ( | const QString & | file | ) | |
throw | ( | AbortException | |||
) |
constructor
camitk::ImageComponent::ImageComponent | ( | vtkSmartPointer< vtkImageData > | anImageData, |
const QString & | name, | ||
bool | copy = false , |
||
ImageOrientationHelper::PossibleImageOrientations | initialOrientation = ImageOrientationHelper::RAI |
||
) | |||
throw | ( | AbortException | |
) |
Creates an ImageComponent from a vtkImageData.
anImageData | : volume image of the new ImageComponent |
name | name to be given to the Component (this name will apear in the explorer) |
copy | perform or not a deep copy of the image given in parameters. |
initialOrientation | the initial orientation of the image. This information may be stored in the file header or in some time (DICOM). If no orientation information is provided, assume the image orientation is RAI. By default, does not copy the original image, but references the corresponding smart pointer (for memory reasons, but if copy is set to true, performs a deep copy). |
|
virtual |
Destructor.
References model, originalImageData, and selectionView.
|
private |
build the SingleImage dcs (one for each image plane);
References arbitrarySlices, axialSlices, coronalSlices, getBoundingBox(), camitk::Component::getFrame(), lut, originalImageData, sagittalSlices, camitk::Component::setParentFrame(), camitk::Component::setRenderingModes, volumeRenderingChild, and camitk::InterfaceGeometry::Wireframe.
Referenced by setImageData().
double camitk::ImageComponent::getActualMaxColor | ( | ) | const |
Max gray level found in the image given its data type.
References originalImageData.
Referenced by initLookupTable().
double camitk::ImageComponent::getActualMinColor | ( | ) | const |
Min gray level found in the image given its data type.
References originalImageData.
Referenced by initLookupTable().
int camitk::ImageComponent::getActualNumberOfColors | ( | ) | const |
Actual Number of colors: difference betweent the maximun and the minimum gray levels found in the image.
References originalImageData.
Referenced by initLookupTable().
SingleImageComponent * camitk::ImageComponent::getArbitrarySlices | ( | ) |
Returns the arbitrary slice.
References arbitrarySlices.
Referenced by ShowArbitrarySliceIn3D::apply().
SingleImageComponent * camitk::ImageComponent::getAxialSlices | ( | ) |
Returns the axial slice.
References axialSlices.
Referenced by ShowAxialSliceIn3D::apply(), MultiPickingWidget::manuallyModified(), and MultiPickingWidget::removeSeedNumber().
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internal method used to put a mesh in volumeRenderingChild and accessoiry display the bounding box
References originalImageData.
Referenced by buildImageComponents().
SingleImageComponent * camitk::ImageComponent::getCoronalSlices | ( | ) |
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get the image volume managed by this Component
Referenced by PixelColorChanger::apply(), VolumeRenderingAction::createVolumeRendering(), ImageLutWidget::draw(), ImageReconstructionAction::getMarchingCubesReconstruction(), MultiPickingWidget::manuallyModified(), ManualThreshold::process(), LaplacianSharpening::process(), MeanFilter::process(), CannyEdgeDetection::process(), GradientMagnitudeRecursiveGaussian::process(), GradientMagnitude::process(), LaplacianRecursiveGaussian::process(), MedianFilter::process(), Laplacian::process(), RegionGrowing::process(), SobelEdgeDetection::process(), ConnectedComponents::process(), OtsuFilter::process(), BoxVOI::process(), Derivative::process(), GaussianFilter::process(), AnisotropicDiffusion::process(), ResampleAction::process(), MorphologicalOperators::process(), ReorientImage::process(), VtkImageComponentExtension::save(), ItkImageComponentExtension::save(), ItkImageComponentExtension::saveImage(), and ImageLutWidget::updateComponent().
vtkSmartPointer< vtkImageData > camitk::ImageComponent::getImageDataWithFrameTransform | ( | ) |
Compute a copy of the original image data on which the frame transform has been applied.
This allows to keep all the frame transform information on the file when saving it.
References camitk::Component::getTransform(), initialFrameTransform, initialImageDataTransform, originalImageData, and rotationMatrix.
Referenced by VtkImageComponentExtension::save().
QString camitk::ImageComponent::getImageName | ( | ) | const |
getter/setter for the property
References arbitrarySlices, axialSlices, coronalSlices, camitk::InteractiveViewer::get3DViewer(), camitk::Component::getName(), originalImageData, camitk::InteractiveViewer::refresh(), sagittalSlices, camitk::SingleImageComponent::setViewSliceIn3D(), camitk::Component::setVisibility(), and volumeRenderingChild.
Referenced by MultiPickingWidget::savePixelList().
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Get the initial image orientation.
References camitk::ImageOrientationHelper::RAI.
Referenced by VtkImageComponentExtension::save().
void camitk::ImageComponent::getLastPixelPicked | ( | int * | x, |
int * | y, | ||
int * | z | ||
) |
Get the last pixel picked using CTRL + LEFT/RIGHT CLICK in voxel index (i, j, k) indicates the voxel index (no notion of voxel size)
References currentPixelPicked, and originalImageData.
Referenced by PixelColorChanger::apply(), and pixelPicked().
Get the last point picked using CTRL + LEFT/RIGHT CLICK in image real coordinates (this takes into account voxel size)
References currentPixelPicked.
Get Get the last point picked using CTRL + LEFT/RIGHT CLICK in world coordinates This takes into account voxel size and image origin (and possible image rigid transforms).
References currentPixelPicked, and camitk::Component::getTransformFromWorld().
Referenced by pixelPicked().
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get the current lookup table
References lut.
Referenced by PixelColorChanger::apply(), ImageLutWidget::applyLUT(), ImageLutWidget::draw(), ImageLutWidget::updateComponent(), and DicomTreeSerieComponent::updateLUT().
double camitk::ImageComponent::getMaxColor | ( | ) | const |
Max possible gray level of the image given its data type.
References originalImageData.
Referenced by getNumberOfColors().
double camitk::ImageComponent::getMinColor | ( | ) | const |
Min possible gray level of the image given its data type.
References originalImageData.
Referenced by getNumberOfColors().
int camitk::ImageComponent::getNumberOfColors | ( | ) | const |
Number of colors: number of possible gray levels in the image computed from the min and the max of the data type ; e.g.
for a volume coded on unsigned char, returns 256.
References getMaxColor(), and getMinColor().
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return number of tabs in property explorer: there is more than one widget
Reimplemented from camitk::Component.
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Number of axial slices (i.e.
dim[2])
Reimplemented from camitk::Component.
References axialSlices, and camitk::Component::getNumberOfSlices().
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get the property widget (to view as tabs in the property explorer): the default property widget and the selection view
Reimplemented from camitk::Component.
References selectionView.
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References camitk::ImageOrientationHelper::RAI.
SingleImageComponent * camitk::ImageComponent::getSagittalSlices | ( | ) |
Returns the sagittal slice.
References sagittalSlices.
Referenced by ShowSagittalSliceIn3D::apply().
MeshComponent * camitk::ImageComponent::getVolumeRenderingChild | ( | ) |
Returns the MeshComponent which will contain the volume rendering actor.
References volumeRenderingChild.
Referenced by VolumeRenderingAction::createVolumeRendering(), and VolumeRenderingAction::process().
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initialize pointers to NULL and other attributes
References camitk::Component::addProperty(), arbitrarySlices, axialSlices, coronalSlices, currentPixelPicked, camitk::Component::getName(), lut, model, originalImageData, sagittalSlices, selectionView, camitk::Property::setReadOnly(), and volumeRenderingChild.
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References getActualMaxColor(), getActualMinColor(), getActualNumberOfColors(), lut, and originalImageData.
Referenced by setImageData().
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the concrete building of the 3D objects (Slice/Geometry): none in this case!
Implements camitk::Component.
void camitk::ImageComponent::pixelPicked | ( | double | x, |
double | y, | ||
double | z, | ||
SingleImageComponent * | whoIsAsking | ||
) |
Method called when a pixel has been picked in the 3D view.
This method tells all the scene3D to display the slice containing the picked pixel. The arguments are the ccordinates of the 3D point.
References currentPixelPicked, camitk::Component::getChildren(), getLastPixelPicked(), getLastPointPickedWorldCoords(), model, originalImageData, selectionView, camitk::InterfaceProperty::setIndexOfPropertyExplorerTab(), and camitk::Component::setSlice.
Referenced by MultiPickingWidget::manuallyModified(), and MultiPickingWidget::removeSeedNumber().
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force refresh of all interactive viewers that are displayng sub-components as ImageComponent is not itself displayed by any viewer
Reimplemented from camitk::Component.
References camitk::Component::childrenComponent, and camitk::Component::refresh().
Referenced by ImageLutWidget::applyLUT(), and setImageName().
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Replaces the current image volume by the one given in parameters.
anImageData | the replacement image data |
If | copy is set to true, performs a deep copy before replacing the image. If copy is set to false, only takes the smart pointer as input. |
initialOrientation | the initial orientation of the replacement image. If no orientation information is provided, assume the image orientation is RAI. |
References arbitrarySlices, axialSlices, coronalSlices, camitk::Component::refreshInterfaceNode(), camitk::Component::removeChild(), sagittalSlices, setImageData(), and volumeRenderingChild.
Referenced by ReorientImage::process().
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Set the image data of the volumic images with the given orientation options.
anImageData | The main vtkImageData of the volumic image. |
copy | Indicate if we do a vtk deep copy of these data or directly work on the one provided. |
initialOrientation | Initial image orientation |
initialTransformMatrix | Initial image rotation (provided as a 4x4 matrix) |
References camitk::Component::addProperty(), buildImageComponents(), camitk::ImageOrientationHelper::getOrientationAsQString(), camitk::Component::getTransform(), camitk::ImageOrientationHelper::getTransformToRAI(), initialFrameTransform, initialImageDataTransform, initialOrientation, initLookupTable(), originalImageData, rotationMatrix, camitk::Property::setReadOnly(), camitk::InterfaceFrame::setTransform(), and updateImageProperties().
Referenced by DicomTreeSerieComponent::DicomTreeSerieComponent(), and replaceImageData().
void camitk::ImageComponent::setImageName | ( | const QString & | imageName | ) |
References refresh(), and camitk::Component::setName().
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Update the lookup table of the image viewer (see InterfaceBitMap).
References lut.
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set selected will select all the Image components (axial, sagittal and coronal).
Reimplemented from camitk::Component.
References camitk::Component::getChildren(), camitk::Component::setSelected(), and camitk::SingleImageComponent::singleImageSelected().
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Update the Properties displayed in the PropertyExplorer It should be called by setImageData to update the properties with respect to the new image data The properties updated are:
References camitk::Component::getName(), and originalImageData.
Referenced by setImageData().
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manages dynamic property viewIn3D
Reimplemented from camitk::Component.
References camitk::Component::refreshInterfaceNode(), camitk::Component::setName(), and camitk::Component::updateProperty().
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Referenced by buildImageComponents(), getArbitrarySlices(), getImageName(), init(), replaceImageData(), and updateImageComponents().
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Referenced by buildImageComponents(), getAxialSlices(), getImageName(), getNumberOfSlices(), init(), replaceImageData(), and updateImageComponents().
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Referenced by buildImageComponents(), getCoronalSlices(), getImageName(), init(), replaceImageData(), and updateImageComponents().
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Store the last pixel selected, in original slices ref.
Referenced by getLastPixelPicked(), getLastPointPickedImageCoords(), getLastPointPickedWorldCoords(), init(), and pixelPicked().
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The initial frame of the image at opening.
Referenced by getImageDataWithFrameTransform(), and setImageData().
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The initial transform to the vtkImageData.
Referenced by getImageDataWithFrameTransform(), and setImageData().
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Initial image orientation.
Referenced by setImageData().
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the current lookup table
Referenced by buildImageComponents(), getLut(), init(), initLookupTable(), and setLut().
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Model to display data.
Referenced by init(), pixelPicked(), and ~ImageComponent().
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the core Image Volume that is managed here
Referenced by buildImageComponents(), getActualMaxColor(), getActualMinColor(), getActualNumberOfColors(), getBoundingBox(), getImageDataWithFrameTransform(), getImageName(), getLastPixelPicked(), getMaxColor(), getMinColor(), init(), initLookupTable(), pixelPicked(), setImageData(), updateImageComponents(), updateImageProperties(), and ~ImageComponent().
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The rotation matrix, that might have been altered by the user Will be saved in header file information as TransformMatrix tag.
Referenced by getImageDataWithFrameTransform(), and setImageData().
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Referenced by buildImageComponents(), getImageName(), getSagittalSlices(), init(), replaceImageData(), and updateImageComponents().
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Tab displaying data selected point in the property explorer.
Referenced by getPropertyWidgetAt(), init(), pixelPicked(), and ~ImageComponent().
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When an action computes volume rendering for an image, it stores the corresponding actor as a prop of this Component.
Referenced by buildImageComponents(), getImageName(), getVolumeRenderingChild(), init(), and replaceImageData().