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class | Array2d |
| Simple 2-d array class. More...
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class | Atom |
| Atom class. More...
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class | Atom_list |
| Atom list class. More...
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class | AtomSF |
| Atomic scattering factor object. More...
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class | AtomShapeFn |
| Atomic shape function object. More...
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class | BasisFn_aniso_gaussian |
| simple anisotropic Gaussian basis function More...
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class | BasisFn_base |
| abstract base class for resolution function basis functions More...
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class | BasisFn_binner |
| simple binning basis function More...
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class | BasisFn_expcubic |
| simple Expcubic basis function More...
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class | BasisFn_gaussian |
| simple Gaussian basis function More...
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class | BasisFn_linear |
| simple linear basis function More...
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class | BasisFn_log_aniso_gaussian |
| simple anisotropic Gaussian basis function More...
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class | BasisFn_log_gaussian |
| simple log Gaussian basis function More...
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class | BasisFn_spline |
| simple smooth basis function More...
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class | CCell |
| CCell container. More...
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class | Cell |
| Cell object. More...
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class | Cell_descr |
| cell description (automatically converts to radians) More...
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class | CGrid_sampling |
| CGrid_sampling container. More...
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class | CHKL_data |
| Reflection data list container. More...
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class | CHKL_info |
| HKL list and indexing object container. More...
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class | ClipperInstance |
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class | ClipperInstantiator |
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class | CNXmap |
| Non-Crystallographic map container. More...
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class | CNXmap_operator |
| Non-Crystallographic map operator container. More...
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struct | Compare_grid |
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class | Container |
| Definition for a generic container Object. More...
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class | Coord_frac |
| fractional (cell) coordinates More...
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class | Coord_grid |
| Grid coordinate. More...
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class | Coord_map |
| map coordinate: this is like Coord_grid, but non-integer More...
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class | Coord_orth |
| orthogonal (Angstrom) coordinates More...
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class | Coord_reci_frac |
| fractional reciprocal coordinate (i.e. non-integer hkl) More...
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class | Coord_reci_orth |
| orthogonal reciprocal coordinate (length of which is invresolsq) More...
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class | CResolution |
| Resolution container. More...
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class | CSpacegroup |
| Spacegroup container. More...
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class | Curv_frac |
| fractional (cell) curvatures, with respect to fractional u,v,w More...
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class | Curv_map |
| map coordinate curvatures, with respect to grid u,v,w More...
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class | Curv_orth |
| orthogonal (Angstom) curvatures, with respect to orthogonal x,y,z More...
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class | CXmap |
| Crystallographic map container. More...
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class | Datatype_base |
| Reflection data type objects. More...
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class | Euler |
| Euler angle class. More...
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class | Euler_ccp4 |
| Euler_ccp4 angle class. More...
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class | FFTmap |
| FFTmap: P1 map with symmetry used for calculating FFTs. More...
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class | FFTmap_base |
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class | FFTmap_p1 |
| FFTmap_p1: low level P1 map used for calculating FFTs. More...
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class | FFTmap_sparse_p1_base |
| base type for sparse P1 fft maps More...
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class | FFTmap_sparse_p1_hx |
| FFTmap_sparse_p1_hx: low level sparse P1 map used for calculating FFTs. More...
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class | FFTmap_sparse_p1_xh |
| FFTmap_sparse_p1_xh: low level sparse P1 map used for calculating FFTs. More...
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class | Generic_ordinal |
| Generic ordinal gernerator. More...
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class | Grad_frac |
| fractional (cell) gradient, with respect to fractional u,v,w More...
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class | Grad_map |
| map coordinate gradient, with respect to grid u,v,w More...
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class | Grad_orth |
| orthogonal (Angstom) gradient, with respect to orthogonal x,y,z More...
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class | Grid |
| generic grid More...
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class | Grid_range |
| Grid range class: defines array limits for a grid. More...
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class | Grid_sampling |
| Grid sampling of a unit cell. More...
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class | Histogram |
| General histogram class. More...
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class | HKL |
| reflection 'Miller' index More...
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class | HKL_class |
| reflection class More...
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class | HKL_data |
| HKL_data<> More...
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class | HKL_data_base |
| HKL_data_base. More...
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class | HKL_data_cacheobj |
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class | HKL_info |
| HKL list container and tree root. More...
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class | HKL_lookup |
| Fast reflection lookup object. More...
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class | HKL_sampling |
| HKL sampling of reciprocal space. More...
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class | Interp_cubic |
| Wrapper class for third-order (cubic) interpolation fns. More...
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class | Interp_linear |
| Wrapper class for first-order (linear) interpolation fns. More...
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class | Interp_nearest |
| Wrapper class for zeroth-order (nearest neighbour) interpolation fns. More...
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class | Isymop |
| Integerised symmetry matrix. More...
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class | LogPhaseProb |
| Log phase probability distribution object. More...
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class | Map_index_sort |
| Generic map sorting class. More...
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class | Map_stats |
| Generic map statistics class. More...
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class | Mat33 |
| 3x3-matrix class More...
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class | Mat33sym |
| Compressed form for 3x3 symmetric matrix class. More...
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class | Matrix |
| General matrix class: like Array2d but with numerical methods. More...
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class | Message |
| Message handler class. More...
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class | Message_base |
| Base type for messages. More...
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class | Message_ctor |
| Constructor message (level = 2) More...
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class | Message_dtor |
| Destructor message (level = 2) More...
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class | Message_fatal |
| Fatal message (level = 9) More...
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class | Message_generic |
| Generic message. More...
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class | Message_info |
| Info message (level = 1) More...
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class | Message_warn |
| Warning message (level = 5) More...
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class | Metric_tensor |
| Metric tensor. More...
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class | Mutex |
| Mutex class: used for locking and unlocking shared resources. More...
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class | NX_operator |
| NX_operator: non-crystal map operator. More...
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class | NXmap |
| NXmap<T>: actual non-crystallographic map class. More...
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class | NXmap_base |
| NXmap_base: base for non-crystallographic map class. More...
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class | NXmap_operator |
| NXmap_operator: non-crystal map operator referencing a particular NXmap. More...
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class | ObjectCache |
| Object Cache manager. More...
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class | Polar_ccp4 |
| Polar_ccp4 angle class. More...
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class | Prob_phi_2d |
| 2-d angular probability distibution class More...
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class | Property |
| Template for a property holding an arbitrary type. More...
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class | Property_base |
| Base class for properties of arbitrary types. More...
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class | PropertyManager |
| Class for holding a list of labelled properties of arbitrary types. More...
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class | Ramachandran |
| Ramachandran plot class. More...
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class | Range |
| Range - upper and lower bounds of some type. More...
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class | Range_sampling |
| Range sampling: discrete sampling of a real range. More...
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class | Resolution |
| Resolution in angstroms. More...
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class | Resolution_ordinal |
| Resolution ordinal gernerator. More...
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class | ResolutionFn |
| 2nd order resolution function evaluator More...
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class | ResolutionFn_nonlinear |
| 2nd order resolution function evaluator More...
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class | Rotation |
| Rotation class. More...
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class | RTop |
| Rotation-translation operator. More...
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class | RTop_frac |
| Fractional operator class. More...
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class | RTop_orth |
| Orthogonal operator class. More...
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class | Spacegroup |
| Spacegroup object. More...
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class | Spgr_cacheobj |
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class | Spgr_descr |
| spacegroup description More...
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class | String |
| String extension with simple parsing methods. More...
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class | Symop |
| Crystallographic symmetry operator. More...
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class | Symop_code |
| Compressed encoded symmetry operator. More...
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class | TargetFn_base |
| abstract base class for least-squares resolution function target functions More...
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class | TargetFn_meanEnth |
| simple mean |E|n target More...
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class | TargetFn_meanFnth |
| simple mean |F|n target More...
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class | TargetFn_scaleEsq |
| |E|2 scaling target More...
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class | TargetFn_scaleF1F2 |
| |F|2 scaling target More...
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class | TargetFn_scaleI1I2 |
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class | TargetFn_scaleLogF1F2 |
| log |F|2 scaling target More...
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class | TargetFn_scaleLogI1I2 |
| log |I| scaling target More...
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class | TargetFn_sigmaa |
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class | TargetFn_sigmaa_omegaa |
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class | Test_base |
| Base class for clipper self-test classes. More...
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class | Test_core |
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class | Thread_base |
| Thread base class: Override this to create new threads. More...
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class | U_aniso_frac |
| Anisotropic fractional atomic displacement parameters. More...
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class | U_aniso_orth |
| Anisotropic orthogonal atomic displacement parameters. More...
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class | Util |
| Utility class. More...
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class | Vec3 |
| 3-vector class More...
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class | Xmap |
| Xmap<T>: actual crystallographic map class. More...
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class | Xmap_base |
| Xmap_base: base for crystallographic map class. More...
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class | Xmap_cacheobj |
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template<class T > |
int | operator== (const Vec3< T > &v1, const Vec3< T > &v2) |
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template<class T > |
int | operator!= (const Vec3< T > &v1, const Vec3< T > &v2) |
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template<class T > |
Vec3< T > | operator- (const Vec3< T > &v) |
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template<class T > |
Vec3< T > | operator+ (const Vec3< T > &v1, const Vec3< T > &v2) |
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template<class T > |
Vec3< T > | operator- (const Vec3< T > &v1, const Vec3< T > &v2) |
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template<class T > |
Vec3< T > | operator* (const T &s, const Vec3< T > &v1) |
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template<class T > |
Vec3< T > | operator* (const Vec3< T > &v1, const T &s) |
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template<class T > |
T | operator* (const Vec3< T > &v1, const Vec3< T > &v2) |
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template<class T > |
Vec3< T > | operator* (const Mat33< T > &m, const Vec3< T > &v) |
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template<class T > |
Vec3< T > | operator* (const Vec3< T > &v, const Mat33< T > &m) |
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template<class T > |
Mat33< T > | operator* (const Mat33< T > &m1, const Mat33< T > &m2) |
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template<class T > |
Mat33< T > | operator+ (const Mat33< T > &m1, const Mat33< T > &m2) |
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template<class T > |
Mat33< T > | operator- (const Mat33< T > &m) |
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template<class T > |
Vec3< T > | operator* (const Mat33sym< T > &m, const Vec3< T > &v) |
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template<class T > |
Mat33sym< T > | operator+ (const Mat33sym< T > &m1, const Mat33sym< T > &m2) |
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template<class T > |
Mat33sym< T > | operator- (const Mat33sym< T > &m) |
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template<class T > |
Vec3< T > | operator* (const RTop< T > &r, const Vec3< T > &v) |
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template<class T > |
RTop< T > | operator* (const RTop< T > &r1, const RTop< T > &r2) |
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template<class T > |
std::vector< T > | operator* (const Matrix< T > &m, const std::vector< T > &v) |
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Rotation | operator* (const Rotation &r1, const Rotation &r2) |
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bool | reci_asu (const Spgr_descr::Symop_codes &ops, data::ASUfn asufn) |
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Vec3 | real_asu (const Spgr_descr::Symop_codes &ops) |
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All normal clipper objects except data objects are defined in this namespace.