Modifier and Type | Class and Description |
---|---|
class |
CobraToFbcConverter
fbc
COBRA to SBML Level 3 “fbc” converter.
|
class |
CompFlatteningConverter
comp
'Flattens' a model, removing composition.
|
class |
FbcToCobraConverter
fbc
SBML Level 3 “fbc” to COBRA converter.
|
class |
FbcV1ToV2Converter
fbc
Convert “fbc” Version 1 models to Version 2
|
class |
FbcV2ToV1Converter
fbc
Convert “fbc” Version 2 models to Version 1
|
class |
SBMLFunctionDefinitionConverter
Converter to expand user-defined functions in-line.
|
class |
SBMLIdConverter
Converter for replacing object identifiers.
|
class |
SBMLInferUnitsConverter
Converter for inferring and setting parameter units.
|
class |
SBMLInitialAssignmentConverter
Converter that removes SBML initial assignments.
|
class |
SBMLLevel1Version1Converter
Whole-document SBML Level/Version converter.
|
class |
SBMLLevelVersionConverter
Whole-document SBML Level/Version converter.
|
class |
SBMLLocalParameterConverter
Converter to turn local parameters into global ones.
|
class |
SBMLReactionConverter
Converter to replace reactions with SBML rate rules.
|
class |
SBMLRuleConverter
Converter that sorts SBML rules and assignments.
|
class |
SBMLStripPackageConverter
Converter that removes SBML Level 3 packages.
|
class |
SBMLUnitsConverter
Converts a model's existing units to SI units.
|
Modifier and Type | Method and Description |
---|---|
SBMLConverter |
CobraToFbcConverter.cloneObject()
Creates and returns a deep copy of this
CobraToFbcConverter object. |
SBMLConverter |
SBMLStripPackageConverter.cloneObject()
Creates and returns a deep copy of this
SBMLStripPackageConverter
object. |
SBMLConverter |
SBMLInferUnitsConverter.cloneObject()
Creates and returns a deep copy of this
SBMLInferUnitsConverter
object. |
SBMLConverter |
SBMLRuleConverter.cloneObject()
Creates and returns a deep copy of this
SBMLLevelVersionConverter
object. |
SBMLConverter |
SBMLIdConverter.cloneObject()
Creates and returns a deep copy of this
SBMLIdConverter
object. |
SBMLConverter |
SBMLConverter.cloneObject()
Creates and returns a deep copy of this
SBMLConverter object. |
SBMLConverter |
SBMLLevelVersionConverter.cloneObject()
Creates and returns a deep copy of this
SBMLLevelVersionConverter
object. |
SBMLConverter |
FbcToCobraConverter.cloneObject()
Creates and returns a deep copy of this
FbcToCobraConverter object. |
SBMLConverter |
CompFlatteningConverter.cloneObject()
Creates and returns a deep copy of this
CompFlatteningConverter . |
SBMLConverter |
SBMLUnitsConverter.cloneObject()
Creates and returns a deep copy of this
SBMLUnitsConverter
object. |
SBMLConverter |
SBMLLevel1Version1Converter.cloneObject()
Creates and returns a deep copy of this
SBMLLevel1Version1Converter
object. |
SBMLConverter |
SBMLReactionConverter.cloneObject()
Creates and returns a deep copy of this
SBMLReactionConverter
object. |
SBMLConverter |
SBMLInitialAssignmentConverter.cloneObject()
Creates and returns a deep copy of this
SBMLInitialAssignmentConverter
object. |
SBMLConverter |
FbcV2ToV1Converter.cloneObject()
Creates and returns a deep copy of this
FbcV2ToV1Converter object. |
SBMLConverter |
FbcV1ToV2Converter.cloneObject()
Creates and returns a deep copy of this
FbcV1ToV2Converter . |
SBMLConverter |
SBMLFunctionDefinitionConverter.cloneObject()
Creates and returns a deep copy of this
SBMLFunctionDefinitionConverter
object. |
SBMLConverter |
SBMLLocalParameterConverter.cloneObject()
Creates and returns a deep copy of this
SBMLLocalParameterConverter
object. |
SBMLConverter |
SBMLConverterRegistry.getConverterByIndex(int index)
Returns the converter with the given index number.
|
SBMLConverter |
SBMLConverterRegistry.getConverterFor(ConversionProperties props)
Returns the converter that best matches the given configuration
properties.
|
Modifier and Type | Method and Description |
---|---|
int |
SBMLConverterRegistry.addConverter(SBMLConverter converter)
Adds the given converter to the registry of SBML converters.
|
Constructor and Description |
---|
SBMLConverter(SBMLConverter orig)
Copy constructor.
|