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OpenMS
ItraqQuantifier
ItraqQuantifier Member List
This is the complete list of members for
ItraqQuantifier
, including all inherited members.
CHANNEL_COUNT
ItraqConstants
static
channel_map_
ItraqQuantifier
private
ChannelInfo
typedef
ItraqQuantifier
ChannelMapType
typedef
ItraqQuantifier
CHANNELS_EIGHTPLEX
ItraqConstants
static
CHANNELS_FOURPLEX
ItraqConstants
static
CHANNELS_TMT_SIXPLEX
ItraqConstants
static
check_defaults_
DefaultParamHandler
protected
DefaultParamHandler
(const String &name)
DefaultParamHandler
DefaultParamHandler
(const DefaultParamHandler &rhs)
DefaultParamHandler
defaults_
DefaultParamHandler
protected
defaultsToParam_
()
DefaultParamHandler
protected
EIGHTPLEX
enum value
ItraqConstants
error_name_
DefaultParamHandler
protected
FOURPLEX
enum value
ItraqConstants
getDefaults
() const
DefaultParamHandler
getIsotopeMatrixAsStringList
(const int itraq_type, const IsotopeMatrices &isotope_corrections)
ItraqConstants
static
getName
() const
DefaultParamHandler
getParameters
() const
DefaultParamHandler
getStats
() const
ItraqQuantifier
getSubsections
() const
DefaultParamHandler
initChannelMap
(const int itraq_type, ChannelMapType &map)
ItraqConstants
static
initIsotopeCorrections_
()
ItraqQuantifier
private
isIdentityCorrectionMatrix_
(const Matrix< double > &channel_frequency) const
ItraqQuantifier
private
isotope_corrections_
ItraqQuantifier
private
ISOTOPECORRECTIONS_EIGHTPLEX
ItraqConstants
static
ISOTOPECORRECTIONS_FOURPLEX
ItraqConstants
static
ISOTOPECORRECTIONS_TMT_SIXPLEX
ItraqConstants
static
IsotopeMatrices
typedef
ItraqQuantifier
itraq_type_
ItraqQuantifier
private
ITRAQ_TYPES
enum name
ItraqConstants
ItraqQuantifier
()
ItraqQuantifier
ItraqQuantifier
(Int itraq_type)
ItraqQuantifier
explicit
ItraqQuantifier
(Int itraq_type, const Param ¶m)
ItraqQuantifier
ItraqQuantifier
(const ItraqQuantifier &cp)
ItraqQuantifier
operator=
(const ItraqQuantifier &rhs)
ItraqQuantifier
OpenMS::DefaultParamHandler::operator=
(const DefaultParamHandler &rhs)
DefaultParamHandler
virtual
operator==
(const DefaultParamHandler &rhs) const
DefaultParamHandler
virtual
param_
DefaultParamHandler
protected
reconstructChannelInfo_
(const ConsensusMap &consensus_map)
ItraqQuantifier
private
run
(const ConsensusMap &consensus_map_in, ConsensusMap &consensus_map_out)
ItraqQuantifier
setDefaultParams_
()
ItraqQuantifier
protected
setName
(const String &name)
DefaultParamHandler
setParameters
(const Param ¶m)
DefaultParamHandler
SIZE_OF_ITRAQ_TYPES
enum value
ItraqConstants
stats_
ItraqQuantifier
private
subsections_
DefaultParamHandler
protected
TMT_SIXPLEX
enum value
ItraqConstants
translateIsotopeMatrix
(const int &itraq_type, const IsotopeMatrices &isotope_corrections)
ItraqConstants
static
updateChannelMap
(const StringList &active_channels, ChannelMapType &map)
ItraqConstants
static
updateIsotopeMatrixFromStringList
(const int itraq_type, const StringList &channels, IsotopeMatrices &isotope_corrections)
ItraqConstants
static
updateMembers_
()
ItraqQuantifier
protected
virtual
warn_empty_defaults_
DefaultParamHandler
protected
~DefaultParamHandler
()
DefaultParamHandler
virtual
OpenMS / TOPP release 2.0.0
Documentation generated on Tue Nov 1 2016 16:34:46 using doxygen 1.8.11