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XTandemInfileXMLHandler.h
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34 
35 #ifndef OPENMS_FORMAT_HANDLERS_XTANDEMINFILEXMLHANDLER_H
36 #define OPENMS_FORMAT_HANDLERS_XTANDEMINFILEXMLHANDLER_H
37 
39 
40 namespace OpenMS
41 {
42  class XTandemInfile;
43  namespace Internal
44  {
45 
51  {
55  };
56 
61  class OPENMS_DLLAPI XTandemInfileXMLHandler :
62  public XMLHandler
63  {
64 public:
65 
67  XTandemInfileXMLHandler(const String & filename, std::vector<XTandemInfileNote> & notes, XTandemInfile * infile);
68 
70  virtual ~XTandemInfileXMLHandler();
71 
72  // Docu in base class
73  void endElement(const XMLCh * const /*uri*/, const XMLCh * const /*local_name*/, const XMLCh * const qname);
74 
75  // Docu in base class
76  void startElement(const XMLCh * const /*uri*/, const XMLCh * const /*local_name*/, const XMLCh * const qname, const xercesc::Attributes & attributes);
77 
78  // Docu in base class
79  void characters(const XMLCh * const chars, const XMLSize_t /*length*/);
80 
81 protected:
82 
83  std::vector<XTandemInfileNote> & notes_;
84 
86 
88 
90  };
91 
92  } // namespace Internal
93 } // namespace OpenMS
94 
95 #endif // OPENMS_FORMAT_HANDLERS_XTANDEMXMLHANDLER_H
A more convenient string class.
Definition: String.h:57
XTandemInfile * infile_
Definition: XTandemInfileXMLHandler.h:85
Handler that is used for parsing XTandemXML data.
Definition: XTandemInfileXMLHandler.h:61
XTandem input file.
Definition: XTandemInfile.h:52
std::ifstream infile
Questionable file tested by TEST_FILE_EQUAL.
String note_type
Definition: XTandemInfileXMLHandler.h:52
Base class for XML handlers.
Definition: XMLHandler.h:99
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:47
XTandemInfileNote actual_note_
Definition: XTandemInfileXMLHandler.h:87
String note_label
Definition: XTandemInfileXMLHandler.h:53
String tag_
Definition: XTandemInfileXMLHandler.h:89
String note_value
Definition: XTandemInfileXMLHandler.h:54
Note representation of bioml structure used by XTandem.
Definition: XTandemInfileXMLHandler.h:50
std::vector< XTandemInfileNote > & notes_
Definition: XTandemInfileXMLHandler.h:83

OpenMS / TOPP release 2.0.0 Documentation generated on Tue Nov 1 2016 16:34:46 using doxygen 1.8.11