public abstract class MsaInferrer
extends java.lang.Object
Constructor and Description |
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MsaInferrer() |
Modifier and Type | Method and Description |
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java.lang.Object |
clone() |
abstract java.lang.String |
getErrorDescription() |
abstract int |
getExitCode() |
abstract Msa |
infer(java.io.File path_to_input_seqs,
java.util.List<java.lang.String> opts) |
abstract Msa |
infer(java.util.List<MolecularSequence> seqs,
java.util.List<java.lang.String> opts) |
static boolean |
isInstalled(java.lang.String path_to_prg) |
public abstract java.lang.String getErrorDescription()
public abstract int getExitCode()
public static boolean isInstalled(java.lang.String path_to_prg)
public java.lang.Object clone()
clone
in class java.lang.Object
public abstract Msa infer(java.io.File path_to_input_seqs, java.util.List<java.lang.String> opts) throws java.io.IOException, java.lang.InterruptedException
java.io.IOException
java.lang.InterruptedException
public abstract Msa infer(java.util.List<MolecularSequence> seqs, java.util.List<java.lang.String> opts) throws java.io.IOException, java.lang.InterruptedException
java.io.IOException
java.lang.InterruptedException