public class AtomData
extends java.lang.Object
Modifier and Type | Field | Description |
---|---|---|
int |
ac |
|
int |
adpMode |
|
int[] |
atomicNumber |
|
int[] |
atomIndex |
|
int[] |
atomMolecule |
|
float[] |
atomRadius |
|
Atom[] |
atoms |
|
BS |
bsIgnored |
|
BS[] |
bsMolecules |
|
BS |
bsSelected |
|
java.lang.String |
fileName |
|
int |
firstAtomIndex |
|
int |
firstModelIndex |
|
float |
hAtomRadius |
|
javajs.util.P3[][] |
hAtoms |
|
int |
hydrogenAtomCount |
|
int |
lastModelIndex |
|
static int |
MODE_FILL_COORDS |
|
static int |
MODE_FILL_MODEL |
|
static int |
MODE_FILL_MOLECULES |
|
static int |
MODE_FILL_MULTIMODEL |
|
static int |
MODE_FILL_RADII |
|
static int |
MODE_GET_ATTACHED_HYDROGENS |
|
int |
modelIndex |
|
java.lang.String |
modelName |
|
java.lang.String |
programInfo |
|
RadiusData |
radiusData |
|
javajs.util.P3[] |
xyz |
Constructor | Description |
---|---|
AtomData() |
Modifier and Type | Method | Description |
---|---|---|
void |
transformXYZ(javajs.util.M4 mat,
BS bs) |
allow for transformed XYZ
|
public static final int MODE_FILL_MODEL
public static final int MODE_FILL_COORDS
public static final int MODE_FILL_RADII
public static final int MODE_FILL_MOLECULES
public static final int MODE_GET_ATTACHED_HYDROGENS
public static final int MODE_FILL_MULTIMODEL
public java.lang.String programInfo
public java.lang.String fileName
public java.lang.String modelName
public int modelIndex
public BS bsSelected
public BS bsIgnored
public BS[] bsMolecules
public RadiusData radiusData
public int firstAtomIndex
public int firstModelIndex
public int lastModelIndex
public float hAtomRadius
public int[] atomIndex
public Atom[] atoms
public javajs.util.P3[] xyz
public float[] atomRadius
public int[] atomicNumber
public int[] atomMolecule
public javajs.util.P3[][] hAtoms
public int ac
public int hydrogenAtomCount
public int adpMode
public void transformXYZ(javajs.util.M4 mat, BS bs)
mat
- bs
-