public class ReadDistanceMatrix extends DistanceMatrix
IdGroup.Utils
Constructor and Description |
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ReadDistanceMatrix(java.io.PushbackReader input)
read from stream
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ReadDistanceMatrix(java.lang.String file)
read from file
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absoluteDistance, addDistance, getClonedDistances, getClosestIndex, getClosestIndex, getDistance, getDistances, getIdCount, getIdentifier, getIdGroup, getSize, isSymmetric, meanDistance, printPHYLIP, setDistance, setDistances, setIdentifier, setIdGroup, squaredDistance, toString, whichIdNumber
public ReadDistanceMatrix(java.io.PushbackReader input) throws DistanceParseException
DistanceParseException
public ReadDistanceMatrix(java.lang.String file) throws DistanceParseException, java.io.IOException
DistanceParseException
java.io.IOException