picard.analysis
Interfaces
CollectMultipleMetrics.ProgramInterface
Classes
AlignmentSummaryMetrics
AlignmentSummaryMetricsCollector
BaseDistributionByCycleMetrics
CollectAlignmentSummaryMetrics
CollectBaseDistributionByCycle
CollectGcBiasMetrics
CollectInsertSizeMetrics
CollectJumpingLibraryMetrics
CollectMultipleMetrics
CollectOxoGMetrics
CollectOxoGMetrics.CpcgMetrics
CollectQualityYieldMetrics
CollectQualityYieldMetrics.QualityYieldMetrics
CollectRawWgsMetrics
CollectRawWgsMetrics.RawWgsMetrics
CollectRnaSeqMetrics
CollectRrbsMetrics
CollectWgsMetrics
CollectWgsMetrics.WgsMetrics
CompareMetrics
GcBiasDetailMetrics
GcBiasSummaryMetrics
InsertSizeMetrics
JumpingLibraryMetrics
MeanQualityByCycle
QualityScoreDistribution
RnaSeqMetrics
RrbsCpgDetailMetrics
RrbsMetricsCollector
RrbsSummaryMetrics
SinglePassSamProgram
Enums
AlignmentSummaryMetrics.Category
CollectMultipleMetrics.Program
MetricAccumulationLevel