IlluminaBasecallsConverter(File basecallsDir,
File barcodesDir,
int lane,
ReadStructure readStructure,
Map<String,? extends IlluminaBasecallsConverter.ConvertedClusterDataWriter<CLUSTER_OUTPUT_RECORD>> barcodeRecordWriterMap,
boolean demultiplex,
int maxReadsInRamPerTile,
List<File> tmpDirs,
int numProcessors,
boolean forceGc,
Integer firstTile,
Integer tileLimit,
Comparator<CLUSTER_OUTPUT_RECORD> outputRecordComparator,
SortingCollection.Codec<CLUSTER_OUTPUT_RECORD> codecPrototype,
Class<CLUSTER_OUTPUT_RECORD> outputRecordClass,
BclQualityEvaluationStrategy bclQualityEvaluationStrategy,
boolean applyEamssFiltering,
boolean includeNonPfReads) |
IlluminaBasecallsConverter(File basecallsDir,
int lane,
ReadStructure readStructure,
Map<String,? extends IlluminaBasecallsConverter.ConvertedClusterDataWriter<CLUSTER_OUTPUT_RECORD>> barcodeRecordWriterMap,
boolean demultiplex,
int maxReadsInRamPerTile,
List<File> tmpDirs,
int numProcessors,
boolean forceGc,
Integer firstTile,
Integer tileLimit,
Comparator<CLUSTER_OUTPUT_RECORD> outputRecordComparator,
SortingCollection.Codec<CLUSTER_OUTPUT_RECORD> codecPrototype,
Class<CLUSTER_OUTPUT_RECORD> outputRecordClass,
BclQualityEvaluationStrategy bclQualityEvaluationStrategy,
boolean applyEamssFiltering,
boolean includeNonPfReads) |